from pharmadata import pharmaversesdtm
meta = pharmaversesdtm.meta('lb_metabolic')
print(f"Rows: {meta.number_rows:,} Columns: {meta.number_columns}")Rows: 309 Columns: 24lb_metabolic
lb_metabolic
Laboratory Measurements Dataset-metabolic
Variables
Show variable specs
shape: (24, 5)
| variable | label | type | mandatory | role |
|---|---|---|---|---|
| str | str | str | null | null |
| "STUDYID" | "Study Identifier" | "String" | null | null |
| "DOMAIN" | "Domain Abbreviation" | "String" | null | null |
| "USUBJID" | "Unique Subject Identifier" | "String" | null | null |
| "LBSEQ" | "Sequence Number" | "Int32" | null | null |
| "LBTESTCD" | "Lab Test or Examination Short Name" | "String" | null | null |
| "LBTEST" | "Lab Test or Examination Name" | "String" | null | null |
| "LBCAT" | "Category for Lab Test" | "String" | null | null |
| "LBORRES" | "Result or Finding in Original Units" | "String" | null | null |
| "LBORRESU" | "Original Units" | "String" | null | null |
| "LBORNRLO" | "Reference Range Lower Limit in Orig Unit" | "String" | null | null |
| "LBORNRHI" | "Reference Range Upper Limit in Orig Unit" | "String" | null | null |
| "LBSTRESC" | "Character Result/Finding in Std Format" | "String" | null | null |
| "LBSTRESN" | "Numeric Result/Finding in Standard Units" | "Float64" | null | null |
| "LBSTRESU" | "Standard Units" | "String" | null | null |
| "LBSTNRLO" | "Reference Range Lower Limit-Std Units" | "Float64" | null | null |
| "LBSTNRHI" | "Reference Range Upper Limit-Std Units" | "Float64" | null | null |
| "LBNRIND" | "Reference Range Indicator" | "String" | null | null |
| "LBBLFL" | "Baseline Flag" | "String" | null | null |
| "LBFAST" | "Fasting Status" | "String" | null | null |
| "VISITNUM" | "Visit Number" | "Float64" | null | null |
| "VISIT" | "Visit Name" | "String" | null | null |
| "VISITDY" | "Planned Study Day of Visit" | "Float64" | null | null |
| "LBDTC" | "Date/Time of Specimen Collection" | "String" | null | null |
| "LBDY" | "Study Day of Specimen Collection" | "Float64" | null | null |
Examples
from great_docs import tbl_explorer
from pharmadata import pharmaversesdtm
tbl_explorer(pharmaversesdtm.lb_metabolic.head(10))PolarsRows10Columns24 | ||||||||||||||||||||||||
STUDYID str |
DOMAIN str |
USUBJID str |
LBSEQ i32 |
LBTESTCD str |
LBTEST str |
LBCAT str |
LBORRES str |
LBORRESU str |
LBORNRLO str |
LBORNRHI str |
LBSTRESC str |
LBSTRESN f64 |
LBSTRESU str |
LBSTNRLO f64 |
LBSTNRHI f64 |
LBNRIND str |
LBBLFL str |
LBFAST str |
VISITNUM f64 |
VISIT str |
VISITDY f64 |
LBDTC str |
LBDY f64 |
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | CDISCPILOT01 | LB | 01-701-1015 | 1 | ALB | Albumin | CHEMISTRY | 3.8 | g/dL | 3.3 | 4.9 | 38 | 38 | g/L | 33 | 49 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2013-12-26T14:45 | -7 |
| 1 | CDISCPILOT01 | LB | 01-701-1023 | 1 | ALB | Albumin | CHEMISTRY | 4.0 | g/dL | 3.3 | 4.9 | 40 | 40 | g/L | 33 | 49 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2012-07-22T12:13 | -14 |
| 2 | CDISCPILOT01 | LB | 01-701-1028 | 1 | ALB | Albumin | CHEMISTRY | 4.4 | g/dL | 3.5 | 4.6 | 44 | 44 | g/L | 35 | 46 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2013-07-11T12:02 | -8 |
| 3 | CDISCPILOT01 | LB | 01-701-1033 | 1 | ALB | Albumin | CHEMISTRY | 3.8 | g/dL | 3.5 | 4.6 | 38 | 38 | g/L | 35 | 46 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2014-03-10T12:31 | -8 |
| 4 | CDISCPILOT01 | LB | 01-701-1034 | 1 | ALB | Albumin | CHEMISTRY | 4.3 | g/dL | 3.5 | 4.6 | 43 | 43 | g/L | 35 | 46 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2014-06-24T15:30 | -7 |
| 5 | CDISCPILOT01 | LB | 01-701-1015 | 2 | ALP | Alkaline Phosphatase | CHEMISTRY | 34 | U/L | 35 | 115 | 34 | 34 | U/L | 35 | 115 | LOW | Y | Y | 1 | SCREENING 1 | -7 | 2013-12-26T14:45 | -7 |
| 6 | CDISCPILOT01 | LB | 01-701-1023 | 2 | ALP | Alkaline Phosphatase | CHEMISTRY | 98 | U/L | 35 | 115 | 98 | 98 | U/L | 35 | 115 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2012-07-22T12:13 | -14 |
| 7 | CDISCPILOT01 | LB | 01-701-1028 | 2 | ALP | Alkaline Phosphatase | CHEMISTRY | 44 | U/L | 35 | 115 | 44 | 44 | U/L | 35 | 115 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2013-07-11T12:02 | -8 |
| 8 | CDISCPILOT01 | LB | 01-701-1033 | 2 | ALP | Alkaline Phosphatase | CHEMISTRY | 67 | U/L | 35 | 115 | 67 | 67 | U/L | 35 | 115 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2014-03-10T12:31 | -8 |
| 9 | CDISCPILOT01 | LB | 01-701-1034 | 2 | ALP | Alkaline Phosphatase | CHEMISTRY | 41 | U/L | 35 | 115 | 41 | 41 | U/L | 35 | 115 | NORMAL | Y | Y | 1 | SCREENING 1 | -7 | 2014-06-24T15:30 | -7 |