API Reference
Dataclasses
Data-holding classes
- DatasetMeta
-
Metadata of one dataset, in the style of pyreadstat’s metadata object.
Functions
Public functions
- get_output_format()
-
Return the current dataset output format.
- set_output_arrow()
-
Return datasets and metadata as pyarrow Tables for the current context.
- set_output_pandas()
-
Return dataset attributes as pandas DataFrames for the current context.
- set_output_polars()
-
Return dataset attributes as polars DataFrames for the current context.
- output_format()
-
Use name as the dataset output format for a
withblock. - cdiscpilotsdtm.build()
-
The DatasetMeta of one dataset, built once and shared process-wide.
- cdiscpilotsdtm.list_datasets()
-
Names of the available SDTM datasets, sorted alphabetically.
- cdiscpilotsdtm.meta()
-
pyreadstat-style metadata of a dataset.
- cdiscpilotsdtm.meta_tables()
-
Dataset-level metadata: one row per dataset.
- cdiscpilotsdtm.meta_columns()
-
Column-level metadata of every SDTM dataset (long format).
- cdiscpilotsdtm.meta_specs()
-
Column-level specifications of every SDTM dataset (long format).
- cdiscpilotsdtm.to_dict()
-
Every SDTM dataset loaded at once, keyed by name.
- pharmaversesdtm.build()
-
The DatasetMeta of one dataset, built once and shared process-wide.
- pharmaversesdtm.list_datasets()
-
Names of the available SDTM datasets, sorted alphabetically.
- pharmaversesdtm.meta()
-
pyreadstat-style metadata of a dataset.
- pharmaversesdtm.meta_tables()
-
Dataset-level metadata: one row per dataset.
- pharmaversesdtm.meta_columns()
-
Column-level metadata of every SDTM dataset (long format).
- pharmaversesdtm.meta_specs()
-
Column-level specifications of every SDTM dataset (long format).
- pharmaversesdtm.to_dict()
-
Every SDTM dataset loaded at once, keyed by name.
- cdiscpilotadam.build()
-
The DatasetMeta of one dataset, built once and shared process-wide.
- cdiscpilotadam.list_datasets()
-
Names of the available ADaM datasets, sorted alphabetically.
- cdiscpilotadam.meta()
-
pyreadstat-style metadata of a dataset.
- cdiscpilotadam.meta_tables()
-
Dataset-level metadata: one row per dataset.
- cdiscpilotadam.meta_columns()
-
Column-level metadata of every ADaM dataset (long format).
- cdiscpilotadam.meta_specs()
-
Column-level specifications of every ADaM dataset (long format).
- cdiscpilotadam.to_dict()
-
Every ADaM dataset loaded at once, keyed by name.
- pharmaverseadam.build()
-
The DatasetMeta of one dataset, built once and shared process-wide.
- pharmaverseadam.list_datasets()
-
Names of the available ADaM datasets, sorted alphabetically.
- pharmaverseadam.meta()
-
pyreadstat-style metadata of a dataset.
- pharmaverseadam.meta_tables()
-
Dataset-level metadata: one row per dataset.
- pharmaverseadam.meta_columns()
-
Column-level metadata of every ADaM dataset (long format).
- pharmaverseadam.meta_specs()
-
Column-level specifications of every ADaM dataset (long format).
- pharmaverseadam.to_dict()
-
Every ADaM dataset loaded at once, keyed by name.
Constants
Module-level constants and data
- cdiscpilotsdtm.ae
-
Adverse Events
- cdiscpilotsdtm.ae_meta
- cdiscpilotsdtm.cm
-
Concomitant Medications
- cdiscpilotsdtm.cm_meta
- cdiscpilotsdtm.dm
-
Demographics
- cdiscpilotsdtm.dm_meta
- cdiscpilotsdtm.ds
-
Disposition
- cdiscpilotsdtm.ds_meta
- cdiscpilotsdtm.ex
-
Exposure
- cdiscpilotsdtm.ex_meta
- cdiscpilotsdtm.lbch
-
Laboratory Tests Results
- cdiscpilotsdtm.lbch_meta
- cdiscpilotsdtm.lbhe
-
Laboratory Tests Results
- cdiscpilotsdtm.lbhe_meta
- cdiscpilotsdtm.lbur
-
Laboratory Tests Results
- cdiscpilotsdtm.lbur_meta
- cdiscpilotsdtm.mh
-
Medical History
- cdiscpilotsdtm.mh_meta
- cdiscpilotsdtm.qsco
-
Questionnaires
- cdiscpilotsdtm.qsco_meta
- cdiscpilotsdtm.qsda
-
Questionnaires
- cdiscpilotsdtm.qsda_meta
- cdiscpilotsdtm.qsgi
-
Questionnaires
- cdiscpilotsdtm.qsgi_meta
- cdiscpilotsdtm.qshi
-
Questionnaires
- cdiscpilotsdtm.qshi_meta
- cdiscpilotsdtm.qsmm
-
Questionnaires
- cdiscpilotsdtm.qsmm_meta
- cdiscpilotsdtm.qsni
-
Questionnaires
- cdiscpilotsdtm.qsni_meta
- cdiscpilotsdtm.relrec
-
Related Records
- cdiscpilotsdtm.relrec_meta
- cdiscpilotsdtm.sc
-
Subject Characteristics
- cdiscpilotsdtm.sc_meta
- cdiscpilotsdtm.se
-
Subject Elements
- cdiscpilotsdtm.se_meta
- cdiscpilotsdtm.suppae
-
Supplemental Qualifiers for AE
- cdiscpilotsdtm.suppae_meta
- cdiscpilotsdtm.suppdm
-
Supplemental Qualifiers for DM
- cdiscpilotsdtm.suppdm_meta
- cdiscpilotsdtm.suppds
-
Supplemental Qualifiers for DS
- cdiscpilotsdtm.suppds_meta
- cdiscpilotsdtm.supplbch
-
Supplemental Qualifiers for LB
- cdiscpilotsdtm.supplbch_meta
- cdiscpilotsdtm.supplbhe
-
Supplemental Qualifiers for LB
- cdiscpilotsdtm.supplbhe_meta
- cdiscpilotsdtm.supplbur
-
Supplemental Qualifiers for LB
- cdiscpilotsdtm.supplbur_meta
- cdiscpilotsdtm.sv
-
Subject Visits
- cdiscpilotsdtm.sv_meta
- cdiscpilotsdtm.ta
-
Trial Arms
- cdiscpilotsdtm.ta_meta
- cdiscpilotsdtm.te
-
Trial Elements
- cdiscpilotsdtm.te_meta
- cdiscpilotsdtm.ti
-
Trial Inclusion/ Exclusion Criteria
- cdiscpilotsdtm.ti_meta
- cdiscpilotsdtm.ts
-
Trial Summary
- cdiscpilotsdtm.ts_meta
- cdiscpilotsdtm.tv
-
Trial Visits
- cdiscpilotsdtm.tv_meta
- cdiscpilotsdtm.vs
-
Vital Signs
- cdiscpilotsdtm.vs_meta
- pharmaversesdtm.ae
-
Adverse Events
- pharmaversesdtm.ae_meta
- pharmaversesdtm.ae_ophtha
-
Adverse Events for Ophthalmology
- pharmaversesdtm.ae_ophtha_meta
- pharmaversesdtm.ag_neuro
-
Procedure Agents Dataset-neuro
- pharmaversesdtm.ag_neuro_meta
- pharmaversesdtm.be
-
Biospecimen Events
- pharmaversesdtm.be_meta
- pharmaversesdtm.ce_vaccine
-
Clinical Events for Vaccine
- pharmaversesdtm.ce_vaccine_meta
- pharmaversesdtm.cm
-
Concomitant Medication
- pharmaversesdtm.cm_meta
- pharmaversesdtm.dm
-
Demography
- pharmaversesdtm.dm_meta
- pharmaversesdtm.dm_metabolic
-
Demographic Dataset-metabolic
- pharmaversesdtm.dm_metabolic_meta
- pharmaversesdtm.dm_neuro
-
Demographic Dataset-neuro
- pharmaversesdtm.dm_neuro_meta
- pharmaversesdtm.dm_peds
-
Demographic Dataset-pediatrics
- pharmaversesdtm.dm_peds_meta
- pharmaversesdtm.dm_vaccine
-
Demographics for Vaccine
- pharmaversesdtm.dm_vaccine_meta
- pharmaversesdtm.ds
-
Disposition
- pharmaversesdtm.ds_meta
- pharmaversesdtm.eg
-
Electrocardiogram
- pharmaversesdtm.eg_meta
- pharmaversesdtm.ex
-
Exposure
- pharmaversesdtm.ex_meta
- pharmaversesdtm.ex_ophtha
-
Exposure for Ophthalmology
- pharmaversesdtm.ex_ophtha_meta
- pharmaversesdtm.ex_vaccine
-
Exposures for Vaccine
- pharmaversesdtm.ex_vaccine_meta
- pharmaversesdtm.face_vaccine
-
Findings About Clinical Events for Vaccine
- pharmaversesdtm.face_vaccine_meta
- pharmaversesdtm.is_ada
-
Immunogenicity Specimen Assessments for ADA
- pharmaversesdtm.is_ada_meta
- pharmaversesdtm.is_vaccine
-
Immunogenicity Specimen Assessments for Vaccine
- pharmaversesdtm.is_vaccine_meta
- pharmaversesdtm.lb
-
Laboratory Measurements
- pharmaversesdtm.lb_meta
- pharmaversesdtm.lb_metabolic
-
Laboratory Measurements Dataset-metabolic
- pharmaversesdtm.lb_metabolic_meta
- pharmaversesdtm.lb_neuro
-
Laboratory Test Dataset-neuro
- pharmaversesdtm.lb_neuro_meta
- pharmaversesdtm.lb_onco_pcwg3
-
Laboratory Measurements (PSA) for Oncology
- pharmaversesdtm.lb_onco_pcwg3_meta
- pharmaversesdtm.mb
-
Microbiology Specimen
- pharmaversesdtm.mb_meta
- pharmaversesdtm.mh
-
Medical History
- pharmaversesdtm.mh_meta
- pharmaversesdtm.ms
-
Microbiology Susceptibility
- pharmaversesdtm.ms_meta
- pharmaversesdtm.nv_neuro
-
Neurological Assessment Dataset-neuro
- pharmaversesdtm.nv_neuro_meta
- pharmaversesdtm.oe_ophtha
-
Ophthalmic Examinations for Ophthalmology
- pharmaversesdtm.oe_ophtha_meta
- pharmaversesdtm.pc
-
Pharmacokinetic Concentrations
- pharmaversesdtm.pc_meta
- pharmaversesdtm.pp
-
Pharmacokinetic Parameters
- pharmaversesdtm.pp_meta
- pharmaversesdtm.qs_metabolic
-
Questionnaire Dataset-metabolic
- pharmaversesdtm.qs_metabolic_meta
- pharmaversesdtm.qs_ophtha
-
Questionnaire for Ophthalmology
- pharmaversesdtm.qs_ophtha_meta
- pharmaversesdtm.rs_onco
-
Disease Response for Oncology
- pharmaversesdtm.rs_onco_meta
- pharmaversesdtm.rs_onco_ca125
-
Disease Response (GCIG)
- pharmaversesdtm.rs_onco_ca125_meta
- pharmaversesdtm.rs_onco_imwg
-
Disease Response (IMWG)
- pharmaversesdtm.rs_onco_imwg_meta
- pharmaversesdtm.rs_onco_irecist
-
Disease Response (iRECIST) for Oncology
- pharmaversesdtm.rs_onco_irecist_meta
- pharmaversesdtm.rs_onco_lymphoma
-
Disease Response (Lymphoma Lugano 2014)
- pharmaversesdtm.rs_onco_lymphoma_meta
- pharmaversesdtm.rs_onco_pcwg3
-
Disease Response (PCWG3) for Oncology
- pharmaversesdtm.rs_onco_pcwg3_meta
- pharmaversesdtm.rs_onco_recist
-
Disease Response (RECIST 1.1) for Oncology
- pharmaversesdtm.rs_onco_recist_meta
- pharmaversesdtm.sc_ophtha
-
Subject Characteristic for Ophthalmology
- pharmaversesdtm.sc_ophtha_meta
- pharmaversesdtm.sdg_db
-
SDG
- pharmaversesdtm.sdg_db_meta
- pharmaversesdtm.smq_db
-
Standardized MedDRA Queries
- pharmaversesdtm.smq_db_meta
- pharmaversesdtm.suppae
-
Supplemental Adverse Events
- pharmaversesdtm.suppae_meta
- pharmaversesdtm.suppce_vaccine
-
Supplemental Qualifiers for Clinical Events for Vaccine
- pharmaversesdtm.suppce_vaccine_meta
- pharmaversesdtm.suppdm
-
Supplemental Demography
- pharmaversesdtm.suppdm_meta
- pharmaversesdtm.suppdm_vaccine
-
Supplemental Qualifiers for Demographics for Vaccine
- pharmaversesdtm.suppdm_vaccine_meta
- pharmaversesdtm.suppds
-
Supplemental Disposition
- pharmaversesdtm.suppds_meta
- pharmaversesdtm.suppex_vaccine
-
Supplemental Qualifiers for Exposures for Vaccine
- pharmaversesdtm.suppex_vaccine_meta
- pharmaversesdtm.suppface_vaccine
-
Supplemental Qualifiers for Findings About for Clinical Events for Vaccine
- pharmaversesdtm.suppface_vaccine_meta
- pharmaversesdtm.suppis_vaccine
-
Supplemental Qualifiers for Immunogenicity Specimen Assessments for Vaccine
- pharmaversesdtm.suppis_vaccine_meta
- pharmaversesdtm.suppnv_neuro
-
Supplemental for Neurological Assessment Dataset-neuro
- pharmaversesdtm.suppnv_neuro_meta
- pharmaversesdtm.supprs_onco_ca125
-
Supplemental Qualifiers for RS_ONCO_CA125
- pharmaversesdtm.supprs_onco_ca125_meta
- pharmaversesdtm.supprs_onco_imwg
-
Supplemental Qualifiers for RS_ONCO_IMWG
- pharmaversesdtm.supprs_onco_imwg_meta
- pharmaversesdtm.supptr_onco
-
Supplemental Tumor Results for Oncology
- pharmaversesdtm.supptr_onco_meta
- pharmaversesdtm.sv
-
Subject Visits
- pharmaversesdtm.sv_meta
- pharmaversesdtm.tr_onco
-
Tumor Results for Oncology
- pharmaversesdtm.tr_onco_meta
- pharmaversesdtm.tr_onco_recist
-
Tumor Results (RECIST 1.1) for Oncology
- pharmaversesdtm.tr_onco_recist_meta
- pharmaversesdtm.ts
-
Trial Design
- pharmaversesdtm.ts_meta
- pharmaversesdtm.tu_onco
-
Tumor Identification for Oncology
- pharmaversesdtm.tu_onco_meta
- pharmaversesdtm.tu_onco_recist
-
Tumor Identification (RECIST 1.1) for Oncology
- pharmaversesdtm.tu_onco_recist_meta
- pharmaversesdtm.vs
-
Vital Signs
- pharmaversesdtm.vs_meta
- pharmaversesdtm.vs_metabolic
-
Vital signs Dataset-metabolic
- pharmaversesdtm.vs_metabolic_meta
- pharmaversesdtm.vs_peds
-
Vital signs Dataset-pediatrics
- pharmaversesdtm.vs_peds_meta
- pharmaversesdtm.vs_vaccine
-
Vital Signs for Vaccine
- pharmaversesdtm.vs_vaccine_meta
- cdiscpilotadam.adadas
-
ADAS-Cog Analysis
- cdiscpilotadam.adadas_meta
- cdiscpilotadam.adae
-
Adverse Events Analysis Dataset
- cdiscpilotadam.adae_meta
- cdiscpilotadam.adcibc
-
CIBIC+ Analysis
- cdiscpilotadam.adcibc_meta
- cdiscpilotadam.adlbc
-
Analysis Dataset Lab Blood Chemistry
- cdiscpilotadam.adlbc_meta
- cdiscpilotadam.adlbcpv
-
Analysis Dataset Lab Blood Chemistry (Previous Visit)
- cdiscpilotadam.adlbcpv_meta
- cdiscpilotadam.adlbh
-
Analysis Dataset Lab Hematology
- cdiscpilotadam.adlbh_meta
- cdiscpilotadam.adlbhpv
-
Analysis Dataset Lab Hematology (Previous Visit)
- cdiscpilotadam.adlbhpv_meta
- cdiscpilotadam.adlbhy
-
Analysis Dataset Lab Hy’s Law
- cdiscpilotadam.adlbhy_meta
- cdiscpilotadam.adnpix
-
NPI-X Item Analysis Data
- cdiscpilotadam.adnpix_meta
- cdiscpilotadam.adsl
-
Subject-Level Analysis
- cdiscpilotadam.adsl_meta
- cdiscpilotadam.adtte
-
AE Time To 1st Derm. Event Analysis
- cdiscpilotadam.adtte_meta
- cdiscpilotadam.advs
-
Vital Signs Analysis Dataset
- cdiscpilotadam.advs_meta
- pharmaverseadam.adab
-
Anti-Drug Antibody Analysis Dataset
- pharmaverseadam.adab_meta
- pharmaverseadam.adae
-
Adverse Events Analysis
- pharmaverseadam.adae_meta
- pharmaverseadam.adapet_neuro
-
Amyloid PET Scan Analysis Dataset
- pharmaverseadam.adapet_neuro_meta
- pharmaverseadam.adbcva_ophtha
-
Best Corrected Visual Acuity Analysis
- pharmaverseadam.adbcva_ophtha_meta
- pharmaverseadam.adce_vaccine
-
Clinical Events Analysis for Vaccine
- pharmaverseadam.adce_vaccine_meta
- pharmaverseadam.adcm
-
Concomitant Medications Analysis
- pharmaverseadam.adcm_meta
- pharmaverseadam.adcoeq_metabolic
-
Questionnaires Analysis for Metabolic
- pharmaverseadam.adcoeq_metabolic_meta
- pharmaverseadam.adeg
-
Electrocardiogram Tests Analysis
- pharmaverseadam.adeg_meta
- pharmaverseadam.adex
-
Exposure Analysis
- pharmaverseadam.adex_meta
- pharmaverseadam.adface_vaccine
-
Findings About Clinical Events Analysis
- pharmaverseadam.adface_vaccine_meta
- pharmaverseadam.adis_vaccine
-
Immunogenicity Specimen Assessments
- pharmaverseadam.adis_vaccine_meta
- pharmaverseadam.adlb
-
Laboratory Analysis
- pharmaverseadam.adlb_meta
- pharmaverseadam.adlb_metabolic
-
Laboratory Analysis for Metabolic
- pharmaverseadam.adlb_metabolic_meta
- pharmaverseadam.adlb_neuro
-
Laboratory Analysis for Neuroscience
- pharmaverseadam.adlb_neuro_meta
- pharmaverseadam.adlbhy
-
Analysis of Lab Hy’s Law
- pharmaverseadam.adlbhy_meta
- pharmaverseadam.admh
-
Medical History Analysis
- pharmaverseadam.admh_meta
- pharmaverseadam.adnv_neuro
-
Nervous System Analysis Dataset
- pharmaverseadam.adnv_neuro_meta
- pharmaverseadam.adoe_ophtha
-
Exam Analysis for Ophthalmology
- pharmaverseadam.adoe_ophtha_meta
- pharmaverseadam.adpc
-
Pharmacokinetic Concentrations
- pharmaverseadam.adpc_meta
- pharmaverseadam.adpp
-
Pharmacokinetic Parameters
- pharmaverseadam.adpp_meta
- pharmaverseadam.adppk
-
Population Pharmacokinetic
- pharmaverseadam.adppk_meta
- pharmaverseadam.adrs_onco
-
Tumor Response Analysis
- pharmaverseadam.adrs_onco_meta
- pharmaverseadam.adsl
-
Subject Level Analysis
- pharmaverseadam.adsl_meta
- pharmaverseadam.adsl_vaccine
-
Subject Level Analysis for Vaccine
- pharmaverseadam.adsl_vaccine_meta
- pharmaverseadam.adtpet_neuro
-
Tau PET Scan Analysis Dataset
- pharmaverseadam.adtpet_neuro_meta
- pharmaverseadam.adtr_onco
-
Tumor Results Analysis for Oncology
- pharmaverseadam.adtr_onco_meta
- pharmaverseadam.adtte_onco
-
Time to Event Analysis for Oncology
- pharmaverseadam.adtte_onco_meta
- pharmaverseadam.advfq_ophtha
-
Visual Function Questionnaire Analysis
- pharmaverseadam.advfq_ophtha_meta
- pharmaverseadam.advs
-
Vital Signs Analysis
- pharmaverseadam.advs_meta
- pharmaverseadam.advs_metabolic
-
Vital Signs Analysis for Metabolic
- pharmaverseadam.advs_metabolic_meta
- pharmaverseadam.advs_peds
-
Vital Signs Analysis for Pediatrics
- pharmaverseadam.advs_peds_meta